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A Guide to Common Soybean Diseases in The Midwest

February 23, 2021

The potential always exists for a fungal, viral, or bacterial disease to develop in a soybean crop. Yield loss related to a disease can be minimal or dramatic depending on the disease, the environment, time of infection, and the soybean product. Knowing the disease history of a field and keeping abreast of reported disease developments during the growing season can help in making important management decisions to help protect yield potential.

Many of the diseases caused by fungi overwinter on infected crop residue. Because of climatic conditions within an area, some fungi-caused diseases are unable to overwinter; however, the spores can arrive via wind from areas where the disease can overwinter. Plants become infected when splashing rain, water movement through the soil onto roots, or wind brings the pathogen to the plant. Some fungal pathogens can also be seedborne. The fungi then enter plant tissue by 1) growing a germ tube that pierces into tissue, 2) through stomata, or 3) through wounds caused by hail, wind, insects, or mechanical means.

Fungicidal seed treatments can help protect seed and seedlings from most fungi-caused seed and seedling diseases. Foliar fungicides can help protect yield potential, depending on the fungal disease and application timing for the disease. Fungicide resistance has developed with some fungi; therefore, it is important to properly identify the causal fungus for proper fungicide selection. To help deter the development of fungicidal resistance, it is highly suggested that fungicides be rotated based on mode of action. Depending on the pathogen, improved soil drainage and soil compaction management can help reduce the potential for fungal infections. Residue destruction through tillage can help speed up the deterioration of a pathogen source.

Bacterial diseases can also overwinter on infected residue. The bacterium can contact plants through water movement in the soil, splashing rain, wind-driven rain, and mechanical means such as cultivating when plants are wet. Some bacterial pathogens also can be seedborne. Infection occurs when bacteria enter the plant through wounds or natural tissue openings such as stomates.

Most viral diseases rely on a vector such as aphids or thrips to infect a plant. As the vector feeds, infected juices are injected into plant tissue. Scouting for insects that have the potential to vector viral diseases and applying a timely insecticide may help protect plants from becoming infected via insect feeding for some viral diseases However, insecticide applications to manage vectors do not provide adequate control of many viral diseases. Caution should be taken not to spray insecticides without proper identification as many beneficial insects can also be killed.

To identify and manage common soybean diseases, click on a tab.


Figure 1. Bacterial blight lesions on a soybean leaf.
Figure 1. Bacterial blight lesions on a soybean leaf.

Identification, Characteristics, and Diagnosis:

  • Caused by the bacterium Pseudomonas savastanoi pv. glycinea.
  • Pathogen overwinters on residue and can be seed-transmitted.
  • Pathogen spread by wind, rain, and by cultivation when plants are wet.
  • Lesions can occur on all aboveground plant tissues; leaves in the mid to upper canopy are favored.
  • Initial infection appears as small, angular, water-soaked spots that turn yellow, become brown with a yellow halo around the spot, then die (Figure 1).
  • Dead tissue may drop from leaves; however, leaves usually remain attached to the plant.
  • Favored by cool, wet weather. Hot, dry weather stops development.
  • Infected seedlings may be stunted or die.

Management:

  • Plant resistant soybean products and disease-free seed.
  • Rotate with non-host crops.
  • Avoid cultivating when plants are wet.
  • Manage residue through tillage.



Figure 2. Bacterial pustule lesions on a soybean leaf. Picture courtesy of Daren Mueller, Iowa State University, Bugwood.org
Figure 2. Bacterial pustule lesions on a soybean leaf. Picture courtesy of Daren Mueller, Iowa State University, Bugwood.org.

Identification, Characteristics, and Diagnosis:

  • Caused by the bacterium Xanthomonas axonopodis pv. glycines.
  • Pathogen overwinters on infected soybean residue and seed.
  • Pathogen is spread by splashing or windblown water, and cultivation when plants are wet.
  • Initial symptoms include the development of small, yellow-green lesions with higher reddish-brown centers on upper leaf surfaces (Figure 2).
  • More mature lesions produce a small, slightly-raised, pale-colored pustule at the center of the lesion on the underside of the leaf.
  • Lesions can be small to large, irregular, and necrotic.
  • Leaves can become ragged in appearance as dead tissue drops from the leaf.
  • Premature defoliation may occur, which can reduce seed count and size.
  • Favors warm (86 to 92° F) and wet weather.

Management:

  • Plant resistant soybean products.
  • Utilize tillage to help decompose residue.
  • Avoid cultivation when plants are wet.

Sources:

Fungus foliage diseases of soybeans. PPD N. 503. 1990. Reports on Plant Diseases. Integrated Pest Management. https://ipm.illinois.edu/.
Thomas-Murphy, J. Alternaria leaf spot. Diseases of Soybeans. Field Crops. Cornell University. https://fieldcrops.cals.cornell.edu/.
Geisler, L.J. Anthracnose. CROPWATCH. University of Nebraska – Lincoln. https://cropwatch.unl.edu/.
Malvick, D. Anthracnose on soybean. University of Minnesota. https://extension.umn.edu/.
Kelly, H.M. and Stewart, S. Soybean rust. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Smith, D. Asian soybean rust. Wisconsin Field Crops Pathology. University of Wisconsin. https://fyi.extension.wisc.edu/.
Coker, C., Hurst, K., Kirkpatrick, T., Rupe, J., Tingle, C., and Trent, M. 2005. Asian soybean rust. FSA7531. Agricultural and Natural Resources. University of Arkansas. https://www.uaex.edu.
Malvick, D. 2018. Bacterial blight of soybean. University of Minnesota. https://extension.umn.edu/.
Faske, F., Kirkpatrick, T., Zhou, J., and Tzanetakis, I. 2014. Soybean diseases. Arkansas Soybean Production Handbook. Chapter 11. University of Arkansas. https://www.uaex.edu/.
Faske, F., Kirkpatrick, T., Zhou, J., and Tzanetakis, I. 2014. Soybean diseases. Arkansas Soybean Production Handbook. Chapter 11. University of Arkansas. https://www.uaex.edu/.
Giesler, L.J. Bacterial pustule. CROPWATCH. University of Nebraska. https://cropwatch.unl.edu./.
Giesler, L.J. Bean pod mottle virus. CROPWATCH. University of Nebraska. https://cropwatch.unl.edu.
Malvick, D. Bean pod mottle virus on soybean. University of Minnesota. https://extension.umn.edu/.
Smith, D. Bean pod mottle virus. Wisconsin Field Crops Pathology. University of Wisconsin. https://fyi.extension.wisc.edu/.
Westphal, A., Abney, T.S., and Shaner, G. 2006. Brown stem rot. Diseases of Soybean. BP-41-W. Purdue University. https://www.extension.purdue.edu/.
Kelly, H.M. and Stewart, S. Cercospora leaf blight. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Hershman, D.E. 2009. Cercospora leaf blight in Kentucky. Plant Pathology Fact Sheet. PPFS-AG-S-20. University of Kentucky. https://plantpathology.ca.uky.edu.
Smith, D. 2014. Cercospora leaf blight and purple seed stain of soybean. Wisconsin Field Crops Pathology. University of Wisconsin. https://fyi.extension.wisc.edu/.
Melvick, D. 2018. Charcoal rot on soybean. University of Minnesota Extension. https://extension.umn.edu/.
Hershman, D.E. 2011. Charcoal rot of soybean. Plant Pathology Fact Sheet. PPFS-AG-S-02. University of Kentucky. http://plantpathology.ca.uky.edu.
Soybean pod and stem blight. Integrated Crop Management. Iowa State University. https://crops.extension.iastate.edu/.
Malvick, D. 2018. Stem canker on soybean. University of Minnesota Extension. https://extension.umn.edu/.
Kleczewski, N. 2017. Stem canker on soybeans. Field Crops Disease Management. http://extension.udel.edu/.
Kelly, H.M. and Stewart, S. Downy mildew. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Faske, T. and Kirkpatrick, T. Downy mildew of soybean. University of Arkansas. https://www.uaex.edu.
Kelly, H.M. and Stewart, S. Frogeye leaf spot. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Faske, T. 2016. Soybean disease update and management: Frogeye leaf spot. University of Arkansas. http://www.arkansas-crops.com/.
Nelson, B. Fusarium root rot. Soybean Diseases. North Dakota State University. https://www.ndsu.edu/.
Thomas-Murphy, J. Fusarium wilt. Field Crops. Cornell College of Agriculture and Life Sciences. https://fieldcrops.cals.cornell.edu/.
Soybean management guide. Clemson University. https://scsoybeans.org/.
Padgett, G. Nematode management in soybean. Louisiana State University. https://www.lsuagcenter.com/.
Mulrooney, R.P. 2011. Soybean cyst nematode. PP-02. University of Delaware. https://extension.udel.edu/.
Sisson, A. Phyllosticta leaf spot. Integrated Crop Management. Iowa State University. https://crops.extension.iastate.edu/.
Phyllosticta leaf spot of soybean. Crop Protection Network. https://cropprotectionnetwork.org/.
Malvick, D. 2018. Phytophthora root and stem rot on soybean. University of Minnesota. https://extension.umn.edu/.
Smith, D. Phytophthora root and stem rot. Wisconsin Field Crops Pathology. University of Wisconsin. https://fyi.extension.wisc.edu/.
Zitnick-Anderson, K., Markell, S., and Nelson, Jr., B. 2014. Pythium damping-off of soybean. PP1737. https://www.ag.ndsu.edu.
Allen, T. 2012. Soybean seedling disease identification: Pythium damping-off and root rot. Mississippi Crop Situation. Mississippi State University. http://www.mississippi-crops.com.
Padgett, B. 2011. Red crown rot. Root & Lower Stem Diseases. Soybean Disease Atlas. LSU AgCenter. Louisiana State University. https://www.lsuagcenter.com/.
Scott, K. and Dorrance, A. 2017. Rhizoctonia damping-off and root rot of soybeans. Ohioline. The Ohio State University. https://ohioline.osu.edu/.
Kelly, H.M. and Stewart, S. Brown spot. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Faske, T. and Kirkpatrick, T. Brown spot of soybean. University of Arkansas. https://www.uaex.edu.
Kleczewski, N. 2017. Southern blight in soybeans. Field Crops Disease Management. University of Delaware. https://extension.udel.edu/.
Faske, T. and Kirkpatrick, T. Southern blight of soybean. University of Arkansas. https://www.uaex.edu/.
Zhou, J. and Tzanetakis, I.E. Soybean mosaic virus. University of Arkansas. https://www.uaex.edu.
Mueller, D. 2013. Soybean vein necrosis virus identified in Iowa. Integrated Pest Management. Iowa State University. https://crops.extension.iastate.edu/.
Byamukama, E., Dorrance, A., Jardine, D., Malvick, D., Markell, S., Nachappa, P., Sisson, A., and Sweets, L. 2015. Soybean vein necrosis virus. Soybean Disease Management. CPN-1003. Crop Protection Network. www.soybeanresearchinfo.com/.
Zhou, J. and Tzanetakis, I.E. Soybean vein necrosis virus. University of Arkansas. https://www.uaex.edu/.
Kelly, H.M. and Stewart, S. Southern stem canker. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Spurlock, T. 2015. Sudden death syndrome of soybean found. Arkansas Row Crops. University of Arkansas. http://www.arkansas-crops.com.
Kelly, H.M. and Stewart, S. Target leaf spot. Institute of Agriculture. The University of Tennessee https://guide.utcrops.com.
Faske, T. and Kirkpatrick, T. Target spot of soybean. University of Arkansas. https://www.uaex.edu.
Zhou, J. and Tzanetakis, I.E. Tobacco ringspot virus. University of Arkansas. https://www.uaex.edu.
Malvick, D. 2018. Sclerotinia stem rot (white mold) on soybean. University of Minnesota Extension. https://extension.umn.edu.
Smith, D. White mold of soybean (Sclerotinia stem rot). Wisconsin Field Crops Pathology. University of Wisconsin-Madison. https://fyi.extension.wisc.edu.


(Sources verified 6/2019)

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